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Gwas soybean

WebAmong other plant parasitic nematode species, marker-trait associations have been identified using GWAS for resistance to root-knot nematode (Meloidogyne javanica) resistance in soybean (Alekcevetch et al., 2024), root-knot nematode (M. graminicola) resistance in Indian wild rice accessions (Hada et al., 2024), and cyst nematode … WebFeb 2, 2024 · Mapping quantitative trait loci through the use of linkage disequilibrium (LD) in populations of unrelated individuals provides a valuable approach for dissecting the genetic basis of complex traits in …

AccuCalc: A Python Package for Accuracy Calculation in GWAS

WebJan 2, 2014 · In this study, a genome-wide association study (GWAS) was performed to identify quantitative trait loci (QTL) controlling seed protein and oil concentration in 298 … WebThe genome-wide association study (GWAS) is a popular genomic approach that identifies genomic regions associated with a phenotype and, thus, aims to discover causative … snac spay and neuter clinic https://portableenligne.com

GWAS reveals two novel loci for photosynthesis-related traits in soybean

WebApr 1, 2024 · In addition, the entire USDA soybean germplasm collection has been genotyped with the SoySNP50K iSelect BeadChips (Song et al. 2013, 2014, and 2015). … WebNov 1, 2015 · A GWAS for seed protein and oil content on over 12,000 unique G. max accessions was performed, which is the largest GWAS conducted in plants reported to date. We determined the distribution of favorable alleles among subpopulations defined by world region and maturity group (MG) of the 12,000 accessions. rmv fee chart

Genome-wide association study and genomic selection for

Category:Genome-wide association studies Nature Reviews Methods …

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Gwas soybean

The Acid Phosphatase-Encoding Gene GmACP1 Contributes to Soybean …

WebDec 28, 2024 · functions, respectively. In the Analysis module, three functions named ‘Hap-GWAS’, ‘Soy_Haplotype’, and ‘Intro_Hap’ were supplied. With these tools, user may carry out a deep mining for haplotypes in genotyped soybean germplasm. Typical use of SoyFGB v2.0 are demonstrated with followed user cases as example: WebMar 12, 2024 · In this study, GWAS was carried out with four photosynthesis parameters of 219 soybean accessions from different regions, 12 potential QTLs related to …

Gwas soybean

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WebIn this study, we phenotyped 357 soybean landraces at the early vegetative (V2) growth stages and used a 180 K single-nucleotide polymorphism (SNP) soybean array in a genome-wide association study (GWAS) conducted to determine the phenotypic relationships among root traits, elucidate the genetic bases, and identify significant SNPs … WebJan 4, 2024 · We collected WGS data for a total of 855 samples from 833 soybean accessions that cover the worldwide distribution of soybean while including large regional collections from Korea, a central...

WebThis study was conducted to identify single nucleotide polymorphisms (SNPs) associated with the net photosynthetic rate (Pn), stomatal conductance (Cond), intercellular carbon … WebNov 25, 2024 · Soybean is an excellent source of vegetable protein and edible oil. Understanding the genetic basis of protein and oil content will improve the breeding …

WebJan 2, 2014 · To overcome the limitations of linkage analysis, we conducted GWAs to identify the loci associated with P efficiency using 1,536 single nucleotide polymorphisms (SNPs) and the relative phenotypic values at several sites and over several years as P efficiency phenotypes generated in 192 soybean accessions. GWAs were conducted … Web本期我们对GWAS分析做一些简单介绍。GWAS,全称genome-wide association study,即全基因组关联分析。GWAS是一种用于识别遗传区域(基因座)和性状(包括疾病)之 …

WebApr 28, 2024 · Although GWAS is a powerful strategy to analyse the genetic basis of complex traits, few studies have dissected the QTL for salinity-alkalinity tolerance of soybean by GWAS. Soybean accessions may have different degrees of salt and alkaline tolerance at different developmental stages (Phang et al. 2008; Chen et al. 2024b).

WebApr 15, 2024 · The GWAS analysis identified previously unreported genomic regions that were associated with resistance to bean pod mottle virus, brown stem rot, frogeye leaf spot, Phytophthora root rot, and soybean cyst nematode . A full list of identified SNPs and candidate genes for these traits, as well as for all other traits examined in this study using ... snac symantecWebJul 3, 2024 · In soybean, 30 SNP markers associated with 6 yield-related agronomic traits were identified by GWAS (Zatybekov et al. 2024). A certain number of loci and one candidate gene were identified by GWAS of soybean seed weight, and the gene was proved to be related to seed weight in Arabidopsis (Yan et al. 2024). snactac ownerWebGWAS was carried out using combined environment LSMEANS generated from the analysis reported in above with a total of 27,911 SNP markers used for the following traits: soybean seed yield, seed protein concentration, seed oil concentration, plant height, 100 seed weight, days to maturity, and lodging score using FarmCPU model where P + K values … snac south carolinaWebJul 14, 2024 · De novo GWAS and meta-analysis were conducted for … We report a meta-Genome Wide Association Study involving 73 published studies in soybean [Glycine … rmv falmouth maWebNov 4, 2014 · In a study on soybean GWAS analysis, Hwang et al. ( 2014) were able to successfully map most of the previously reported seed protein and oil QTLs to narrower genomic regions than originally reported. Investigations of the genetics underlying WUE in soybean have been limited. snacswellWebAug 26, 2024 · Genome-wide association studies (GWAS) test hundreds of thousands of genetic variants across many genomes to find those statistically associated with a specific trait or disease. This methodology ... rmv falmouthWebMar 12, 2024 · In this study, GWAS was carried out with four photosynthesis parameters of 219 soybean accessions from different regions, 12 potential QTLs related to photosynthesis were identified, and four candidate genes involved in soybean photosynthesis were determined. It is possible to improve soybean overall productivity by modifying these … rmv fee schedule